Publications

Publications

1. Ponmathi Panneerpandian, Helen Jemimah Devanandan, Anantharaj Marimuthu, Chandrabose Karthikeyan and Kumaresan Ganesan (2019), Abacavir induces the transcriptional activity of YY1 and other oncogenic transcription factors in gastric cancer cells, Antiviral Research, (in press) (IF:4.1) 

2. Jaishree Pandian, Ponmathi Panneerpandian, Helen Jemimah Devanandan, Balaji T Sekar, Karthik Balakrishnan, Karthikeyan Selvarasu, Karthikeyan Muthupandi, and Kumaresan Ganesan, Identification of the targeted therapeutic potential of doxycycline for a subset of gastric cancer patients, Annals of the New York Academy of Sciences, 2019, In Press (IF: 4.8)
3. Karthik Balakrishnan, Ponmathi Panneerpandian, Helen Jemimah Devanandan, Balaji T.Sekar, Suresh Kumar Rayala, Kumaresan Ganesan, Salt-mediated transcriptional and proteasomal dysregulations mimic the molecular dysregulations of stomach cancer, Toxicology Invitro, 2019, doi: 10.1016/j.tiv.2019.104588 (IF: 3.1). 

4. Ramani Gopal, Karthikeyan Selvarasu, Ponmathi Panneer Pandian and Kumaresan Ganesan^#, Integrative transcriptome analysis of liver cancer profiles identifies the upstream regulators and clinical significance of ACSM3, Cellular Oncology, 2017, 40(3):219-233. (IF:5.0). 

5. Tamilzhalagan Sembulingam, Dhanasekaran Rathinam and Kumaresan Ganesan^#, Amplified 7q21-22 gene MCM7 and its intronic miR-25 suppress COL1A2 associated genes to sustain intestinal gastric cancer features, Molecular Carcinogenesis, 2017, 56(6):1590-1602 (IF: 3.4).

6. Kalaivani Kalamohan, Dhanasekaran Rathinam, Ponmathi Panneer Pandian and Kumaresan Ganesan^#, Coexpressed modular gene expression reveals inverse correlation between immune responsive transcription and aggressiveness in gastric tumors, Submitted to Cancer Immunology & Immunotherapy, 2017, Apr 12. doi: 10.1007/s00262-017-1998-7 (IF: 4.9).

7. Ramesh V, Selvarasu K, Pandian J, Myilsamy S, Shanmugasundaram C and Ganesan K^#, NFκB activation demarcates a subset of hepatocellular carcinoma patients for targeted therapy, Cellular Oncology, 2016, 39(6):523-536. (IF: 5.0).

8. Thangaraj SV, Shyamsundar V, Krishnamurthy A, Ramani P, Ganesan K, Muthuswami M, Ramshankar V. Molecular Portrait of Oral Tongue Squamous Cell Carcinoma Shown by Integrative Meta-Analysis of Expression Profiles with Validations, PLoS One. 2016 Jun 9;11(6):e0156582 (IF: 2.8) 

9. Tamilzhalagan Sembulingam, Muthulakshmi Muthuswami and Kumaresan Ganesan^#, Juxtaposed genes in 7q21-22 amplicon contribute for two major gastric cancer sub-types by mutual exclusive expression, Submitted to Molecular Carcinogenesis, 2016 Nov 2. doi: 10.1002/mc.22586 (IF: 4).

10. Vignesh Ramesh & Kumaresan Ganesan^#, Integrative Functional Genomic Delineation of the Cascades of Transcriptional Changes Involved in Hepatocellular Carcinoma Progression, International Journal of Cancer, 2016, 139 (7), 1586–1597 (IF: 7.3).

11. Vignesh Ramesh & Kumaresan Ganesan^#, Integrative functional genomic analysis unveils the differing dysregulated metabolic processes across hepatocellular carcinoma stages, Gene. 2016, 588(1):19-29. (IF: 2.6).

12. Ramesh V, Ganesan K^#. Integrative analysis of transcriptome and miRNome unveils the key regulatory connections involved in different stages of hepatocellular carcinoma. Genes to Cells. 2016; 21(9):949-65 (IF: 2.0).

13. Ramani Gopal, Usha Rani, Ram Murugesan, Kirushna Kumar, Ganesh Sanjeev, Kumaresan Ganesan^#, Functional Genomic Investigation of the Molecular Biological Impact of Electron Beam Radiation in Lymphoma Cells, Clinical Lymphoma, Myeloma & Leukemia, 2016 May;16(5):253-263 (IF: 2.0)

14. Kathiresan V, Subburaman S, Krishna AV, Natarajan M, Rathinasamy G, Ganesan K, Ramachandran M., Naringenin Ameliorates Doxorubicin Toxicity and Hypoxic Condition in Dalton's Lymphoma Ascites Tumor Mouse Model: Evidence from Electron Paramagnetic Resonance Imaging. J Environ Pathol Toxicol Oncol. 2016;35(3):249-262, (IF: 1.4)

15. Tamilzhalagan Sembulingam, Muthulakshmi Muthuswami, Jayaprakash Periyasamy, Sun Young Rha, Patrick Tan, Kumaresan Ganesan^#, Upregulated, 7q21-22 amplicon candidate gene SHFM1 confers oncogenic advantage by suppressing p53 function in gastric cancer, 2015, Cellular Signalling, 27(6):1075-86 (IF: 3.94)

16. Kavitha Kandiah, Rajendran Venkatahalam, Chunyan Wang, Suresh Valiyaveettil, Kumaresan Ganesan, In vitro and preliminary in vivo toxicity screening of high-surface-area TiO2-chondroitin-4-sulfate nanocomposites for bone regeneration application, Colloids and Surfaces B: Biointerfaces, 2015, PII: S0927-7765 (15) 00103-4, (IF: 4.3).

17. Mathiyazhagan Arun Divakar,  Velnathan Sudhamani, Sivakumar Shanmugam, Thillaichidambaram Muneeswaran, Sembulingam Tamilzhalagan, Muthiah Ramakritinan and  Kumaresan Ganesan^#, Facile synthesis and characterization of bio-organometallic compounds and their biological activity contour against human pathogens, RSC Adv., 2015,5, 8362-8370 (IF: 3.2)

18. Kalaivani Kalamohan, Jayaprakash Periasamy, Divya Bhaskar Rao, Georgina D Barnabas, Sri Pon Gayatri, Kumaresan Ganesan^#, Transcriptional coexpression network reveals the involvement of varying stem cell features and dysregulations in different gastric cancer subtypes, Molecular Oncology, 1306-25, (IF: 5.6)

19. Subburaman S, Ganesan K, Ramachandran M.,Protective role of naringenin against doxorubicin-induced cardiotoxicity in a rat model: histopathology and mRNA expression profile studies, J Environ Pathol Toxicol Oncology. 2014;33(4):363-76 (IF: 1.2)

20. Annaraj, R. Dhivya, M. Vigneshwar, K. Dharaniyambigai, G. Kumaresan, M. Rajasekaran, Studies on The Enhanced Biological Applications of PVA Loaded Nanocurcumin, Journal of NanoScience and NanoTechnology, 2014, 2 (4), 490-495.

21. Jayaprakash Periasamy, Muthulakshmi Muthuswami, Divya Bhaskar Rao, Patrick Tan and Ganesan Kumaresan^#. Stratification and delineation of gastric cancer signaling by in vitro transcription factor activity profiling and integrative genomics, Cellular Signalling, 2014. 26 (2014) 880–894. (IF: 3.8)

22. Velusamy Gomathi Sankareswari, Devaraj Vinod, Ayyasamy Mahalakshmi, Meena Alamelu, Ganesan Kumaresan, Ramasamy Ramaraj and Seenivasan Rajagopal, Interaction of oxovanadium(IV)–salphen complexes with bovine serum albumin and their cytotoxicity against cancer, Dalton Transactions, 2014, DOI: 10.1039/C3DT52505H (IF: 4.1).

23. Anish Babu, Jayaprakash Periasamy, Amsaveni Gunasekaran, Ganesan Kumaresan, Selvaraj Naicker, Paramasamy Gunasekaran, Ramachandran Murugesan, Polyethylene Glycol-Modified Gelatin/Polylactic Acid Nanoparticles for Enhanced Photodynamic Efficacy of a Hypocrellin Derivative In Vitro, Journal of Biomedical Nanotechnology, 9, 177-192, 2013. (IF: 5.8)

24. Muthulakshmi Muthuswami, Vignesh Ramesh, Saikat Banerjee, Jayaprakash Periyasamy, Soundara Viveka, Divya Rao, Georgina Barnabas, Sweta Ragava, Kumaresan Ganesan#, Breast tumors with elevated expression of 1q candidate genes confer poor clinical outcome and sensitivity to Ras/PI3K inhibition, PLOS One, 2013; 8(10):e77553. Doi: 10.1371/journal.pone.0077553. (IF: 3.2) 

25. Jayaprakash Periasamy, Muthulakshmi Muthuswamy, Vignesh Ramesh, Thangaselvam Muthusamy, Amrita Jain, Chandrabose Karthiheyan, Piyush Trivedi, Rayala Suresh Kumar, Sun Young Rha, Paramasamy Gunasekaran, Partick Tan and Kumaresan Ganesan^#, Multiple oncogenic pathway inhibiting features of nimesulide and celecoxib indicate their repositioning candidacy for gastric cancer therapeutics, Journal of Cancer Sciences & Therapy, 5(4) 126-136, 2013.

26. Kumaresan Ganesan, Saikat Banerjee, Paramasamy Gunasekaran, Patrick Tan, and Suresh K. Rayala, Integrative Functional Genomics in Cancer Research and Its Clinical Implications, 2010, J Cancer Mol 5(3): 65-71.

27. Ooi CH, Ivanova T, Wu J, Lee M, Tan IB, Tao J, Ward L, Koo JH, Gopalakrishnan V, Zhu Y, Cheng LL, Lee J, Rha SY, Chung HC, Ganesan K, So J, Soo KC, Lim D, Chan WH, Wong WK, Bowtell D, Yeoh KG, Grabsch H, Boussioutas A, Tan P., Oncogenic pathway combinations predict clinical prognosis in gastric cancer, PLoS Genetics. 2009 Oct;5(10):e1000676. (IF: 8.5)

28. Kumaresan Ganesan, Tatiana Ivanova, Yonghui Wu, Vikneswari Rajasegaran, Jeanie Wu, Ming Hui Lee, Kun Yu, Sun Young Rha, Hyun Cheol Chung, Bauke Ylstra, Gerrit Meijer, Kon Oi Lian, Heike Grabsch, and Patrick Tan. Inhibition of Gastric Cancer Invasion and Metastasis by PLA2G2A, a Novel β-catenin/TCF Target Gene. Cancer Research, 68 (11): 4277-4286, (IF: 9.3)

29. Kun Yu, Kumaresan Ganesan, Lay Keng Tan, Mirtha Laban, Jeanie Wu, Xiao Dong Zhao, Hongmin Li, Carol Ho Wing Leung, Yansong Zhu, Chia Lin Wei, Shing Chuan Hooi, Lance Miller, Patrick Tan. A Precisely Regulated Gene Expression Cassette Potently Modulates Metastasis and Survival in Multiple Solid Cancers. PLOS Genetics, 4 (7): e1000129, 1-12, (IF: 8.5)

30. Hou Q, Wu YH, Grabsch H, Zhu Y, Leong SH, Ganesan K, Cross D, Tan LK, Tao J, Gopalakrishnan V, Tang BL, Kon OL, Tan P., Integrative genomics identifies RAB23 as an invasion mediator gene in diffuse-type gastric cancer, Cancer Research. 2008 Jun 15;68(12):4623-30. (IF: 9.3)

31. Chen W, Salto-Tellez M, Palanisamy N, Ganesan K, Hou Q, Tan LK, Sii LH, Ito K, Tan B, Wu J, Tay A, Tan KC, Ang E, Tan BK, Tan PH, Ito Y, Tan P., Targets of genome copy number reduction in primary breast cancers identified by integrative genomics., Genes Chromosomes Cancer. 2007 Mar;46(3):288-301. (IF: 4.0)

32. Ou K, Kesuma D, Ganesan K, Yu K, Soon SY, Lee SY, Goh XP, Hooi M, Chen W, Jikuya H, Ichikawa T, Kuyama H, Matsuo E, Nishimura O, Tan P., Quantitative profiling of drug-associated proteomic alterations by combined 2-nitrobenzenesulfenyl chloride (NBS) isotope labeling and 2DE/MS identification., J Proteome Research. 2006 Sep;5(9):2194-206. (IF: 4.2)

33. Kumaresan G, Mathavan S., Molecular diversity and phylogenetic analysis of mariner-like transposons in the genome of the silkworm Bombyx mori., Insect Mol Biol. 2004 Jun;13(3):259-71. (IF: 2.8)

34. KG Mohan, G Kumaresan, S Mathavan, D Muraleedharan, Characterization and cDNA cloning of apolipophorin III gene in the red cotton bug, Dysdercus cingulatus, Entomon, 2002.

35. Kumaresan and S. Mathavan, RGF–PCR: A technique to isolate different copies of a multi-copy gene, Current Science, 2002 82 (4), 442-447. (IF: 1.0)

36. Kumaresan G, Venugopal T, Vikas A, Pandian TJ, Mathavan S., Cloning of partial putative gonadotropin hormone receptor sequence from fish. J Biosci. 2000, 25(1):41-5. (IF: 1.4)